Having problems with the playlists too, so I’m giving that AHK playlist buddy a shot.
Also having problems with overlays. They are not showing up when loaded, and then I lose all controller functions when I exit the game. Even resetting the PS3 wouldn’t get controller function back. I went through a series of install/uninstalls until I finally just made a copy of the retroarch.cfg file and reloaded that after each lockout. I’m wondering if someone else has figured this out and might have a working config file for others to try?

I am scanning all roms at once though, MAME, GBA, SNES, MD, NES, MS, GG and FBA so maybe that is why its taking all night lol